Advanced DEVS Models With Application to Biomedicine

Gabriel Wainer; Shafagh Jafer; Banan Al-Aubidy; Alex Dias; Roderick Bain; Michel Dumontier; James Cheetham

Advanced DEVS Models With Application to Biomedicine

Gabriel Wainer, Shafagh Jafer, Banan Al-Aubidy, Alex Dias, Roderick Bain, Michel Dumontier, James Cheetham

Carleton University

Research output: Contribution to conference › Presentation

Abstract

"Simulation is becoming increasingly important in the analysis and design of complex systems such as those

involving biological processes. The complexity of these systems makes computer simulation an adequate tool to study them under particular experimental conditions. We presented a simulation model for the metabolic pathways in the cells (namely, the Glycolysis and Krebs cycle), using the DEVS formalism and the CD++ tool. Here, we extend this experience, and we show a model on synapsin and vesicles interaction in nerve cells, and another one on the liver functions using similar techniques. Our long term goal is to provide realistic simulations of different biological processes when specific internal or external parameters are applied."--From the paper.

Original language	American English
State	Published - Feb 2007
Externally published	Yes
Event	IMSM'07: International Modeling and Simulation Multiconfrence - Buenos Aires, Argentina Duration: Feb 1 2007 → …

Conference

Conference	IMSM'07: International Modeling and Simulation Multiconfrence
Period	2/1/07 → …

Keywords

cellular automata
DEVS
liver
synapsin
vesicle

Disciplines

Other Biomedical Engineering and Bioengineering

Cite this

@conference{cbae6c7b5c6f42e68889d9a47726c98e,

title = "Advanced DEVS Models With Application to Biomedicine",

abstract = " {"}Simulation is becoming increasingly important in the analysis and design of complex systems such as those involving biological processes. The complexity of these systems makes computer simulation an adequate tool to study them under particular experimental conditions. We presented a simulation model for the metabolic pathways in the cells (namely, the Glycolysis and Krebs cycle), using the DEVS formalism and the CD++ tool. Here, we extend this experience, and we show a model on synapsin and vesicles interaction in nerve cells, and another one on the liver functions using similar techniques. Our long term goal is to provide realistic simulations of different biological processes when specific internal or external parameters are applied.{"}--From the paper. ",

keywords = "cellular automata, DEVS, liver, synapsin, vesicle",

author = "Gabriel Wainer and Shafagh Jafer and Banan Al-Aubidy and Alex Dias and Roderick Bain and Michel Dumontier and James Cheetham",

year = "2007",

month = feb,

language = "American English",

note = "IMSM'07: International Modeling and Simulation Multiconfrence ; Conference date: 01-02-2007",

}

TY - CONF

T1 - Advanced DEVS Models With Application to Biomedicine

AU - Wainer, Gabriel

AU - Jafer, Shafagh

AU - Al-Aubidy, Banan

AU - Dias, Alex

AU - Bain, Roderick

AU - Dumontier, Michel

AU - Cheetham, James

PY - 2007/2

Y1 - 2007/2

N2 - "Simulation is becoming increasingly important in the analysis and design of complex systems such as those involving biological processes. The complexity of these systems makes computer simulation an adequate tool to study them under particular experimental conditions. We presented a simulation model for the metabolic pathways in the cells (namely, the Glycolysis and Krebs cycle), using the DEVS formalism and the CD++ tool. Here, we extend this experience, and we show a model on synapsin and vesicles interaction in nerve cells, and another one on the liver functions using similar techniques. Our long term goal is to provide realistic simulations of different biological processes when specific internal or external parameters are applied."--From the paper.

AB - "Simulation is becoming increasingly important in the analysis and design of complex systems such as those involving biological processes. The complexity of these systems makes computer simulation an adequate tool to study them under particular experimental conditions. We presented a simulation model for the metabolic pathways in the cells (namely, the Glycolysis and Krebs cycle), using the DEVS formalism and the CD++ tool. Here, we extend this experience, and we show a model on synapsin and vesicles interaction in nerve cells, and another one on the liver functions using similar techniques. Our long term goal is to provide realistic simulations of different biological processes when specific internal or external parameters are applied."--From the paper.

KW - cellular automata

KW - DEVS

KW - liver

KW - synapsin

KW - vesicle

M3 - Presentation

T2 - IMSM'07: International Modeling and Simulation Multiconfrence

Y2 - 1 February 2007

ER -