Pediatric cancer variant pathogenicity information exchange (PECANPIE): A cloud-based platform for curating and classifying germline variants

Michael N. Edmonson; Aman N. Patel; Dale J. Hedges; Zhaoming Wang; Evadnie Rampersaud; Chimene A. Kesserwan; Xin Zhou; Yanling Liu; Scott Newman; Michael C. Rusch; Clay L. McLeod; Mark R. Wilkinson; Stephen V. Rice; Thierry Soussi; J. Paul Taylor; Michael Benatar; Jared B. Becksfort; Kim E. Nichols; Leslie L. Robison; James R. Downing; Jinghui Zhang

doi:10.1101/gr.250357.119

Pediatric cancer variant pathogenicity information exchange (PECANPIE): A cloud-based platform for curating and classifying germline variants

Michael N. Edmonson
, Aman N. Patel
, Dale J. Hedges
, Zhaoming Wang
, Evadnie Rampersaud
, Chimene A. Kesserwan
, Xin Zhou
, Yanling Liu
, Scott Newman
, Michael C. Rusch
, Clay L. McLeod
, Mark R. Wilkinson
, Stephen V. Rice
, Thierry Soussi
, J. Paul Taylor
, Michael Benatar
, Jared B. Becksfort
, Kim E. Nichols
, Leslie L. Robison
, James R. Downing

Jinghui Zhang

Research output: Contribution to journal › Article › peer-review

Original language	English
Pages (from-to)	1555-1565
Number of pages	11
Journal	Genome Research
Volume	29
Issue number	9
DOIs	https://doi.org/10.1101/gr.250357.119
State	Published - 2019
Externally published	Yes

ASJC Scopus Subject Areas

Genetics
Genetics(clinical)

Access to Document

10.1101/gr.250357.119

Cite this

Edmonson, M. N., Patel, A. N., Hedges, D. J., Wang, Z., Rampersaud, E., Kesserwan, C. A., Zhou, X., Liu, Y., Newman, S., Rusch, M. C., McLeod, C. L., Wilkinson, M. R., Rice, S. V., Soussi, T., Paul Taylor, J., Benatar, M., Becksfort, J. B., Nichols, K. E., Robison, L. L., ... Zhang, J. (2019). Pediatric cancer variant pathogenicity information exchange (PECANPIE): A cloud-based platform for curating and classifying germline variants. Genome Research, 29(9), 1555-1565. https://doi.org/10.1101/gr.250357.119

Edmonson, MN, Patel, AN, Hedges, DJ, Wang, Z, Rampersaud, E, Kesserwan, CA, Zhou, X, Liu, Y, Newman, S, Rusch, MC, McLeod, CL, Wilkinson, MR, Rice, SV, Soussi, T, Paul Taylor, J, Benatar, M, Becksfort, JB, Nichols, KE, Robison, LL, Downing, JR & Zhang, J 2019, 'Pediatric cancer variant pathogenicity information exchange (PECANPIE): A cloud-based platform for curating and classifying germline variants', Genome Research, vol. 29, no. 9, pp. 1555-1565. https://doi.org/10.1101/gr.250357.119

@article{7a739be63224435da2f0c4f5dbbd1e47,

title = "Pediatric cancer variant pathogenicity information exchange (PECANPIE): A cloud-based platform for curating and classifying germline variants",

author = "Edmonson, \{Michael N.\} and Patel, \{Aman N.\} and Hedges, \{Dale J.\} and Zhaoming Wang and Evadnie Rampersaud and Kesserwan, \{Chimene A.\} and Xin Zhou and Yanling Liu and Scott Newman and Rusch, \{Michael C.\} and McLeod, \{Clay L.\} and Wilkinson, \{Mark R.\} and Rice, \{Stephen V.\} and Thierry Soussi and \{Paul Taylor\}, J. and Michael Benatar and Becksfort, \{Jared B.\} and Nichols, \{Kim E.\} and Robison, \{Leslie L.\} and Downing, \{James R.\} and Jinghui Zhang",

note = "Publisher Copyright: {\textcopyright} 2019 Edmonson et al.",

year = "2019",

doi = "10.1101/gr.250357.119",

language = "English",

volume = "29",

pages = "1555--1565",

journal = "Genome Research",

issn = "1088-9051",

publisher = "Cold Spring Harbor Laboratory Press",

number = "9",

}

TY - JOUR

T1 - Pediatric cancer variant pathogenicity information exchange (PECANPIE)

T2 - A cloud-based platform for curating and classifying germline variants

AU - Edmonson, Michael N.

AU - Patel, Aman N.

AU - Hedges, Dale J.

AU - Wang, Zhaoming

AU - Rampersaud, Evadnie

AU - Kesserwan, Chimene A.

AU - Zhou, Xin

AU - Liu, Yanling

AU - Newman, Scott

AU - Rusch, Michael C.

AU - McLeod, Clay L.

AU - Wilkinson, Mark R.

AU - Rice, Stephen V.

AU - Soussi, Thierry

AU - Paul Taylor, J.

AU - Benatar, Michael

AU - Becksfort, Jared B.

AU - Nichols, Kim E.

AU - Robison, Leslie L.

AU - Downing, James R.

AU - Zhang, Jinghui

PY - 2019

Y1 - 2019

UR - https://www.scopus.com/pages/publications/85071788874

UR - https://www.scopus.com/pages/publications/85071788874#tab=citedBy

U2 - 10.1101/gr.250357.119

DO - 10.1101/gr.250357.119

M3 - Article

C2 - 31439692

AN - SCOPUS:85071788874

SN - 1088-9051

VL - 29

SP - 1555

EP - 1565

JO - Genome Research

JF - Genome Research

IS - 9

ER -

Pediatric cancer variant pathogenicity information exchange (PECANPIE): A cloud-based platform for curating and classifying germline variants

ASJC Scopus Subject Areas

Access to Document

Other files and links

Cite this